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Last data update: 2014.03.03
Data Source
R Release (3.2.3)
CranContrib
BioConductor
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Results 1 - 4 of 4 found.
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code.genotype
(Package: genoCN) :
code bi-allele genotype to numerical value
code a genotype vector, e.g. ("AA", "AC", ...) to a numerical vector based on the count of minor allele, e.g., (0, 1, ...)
● Data Source:
BioConductor
● Keywords: methods
● Alias: code.genotype
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0 images
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genoCNA
(Package: genoCN) :
Copy Number Aberration
extract genotype and copy number calls for copy number aberrations, which are often observed in tumor tissues
● Data Source:
BioConductor
● Keywords: methods
● Alias: genoCNA
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1 images
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genoCNV
(Package: genoCN) :
Copy Number Variation
extract genotype and copy number calls for copy number variation, which are inheritable DNA polymorphisms and are observed in normal tissues
● Data Source:
BioConductor
● Keywords: methods
● Alias: genoCNV
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1 images
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plotCN
(Package: genoCN) :
plot LRR, BAF, and the copy number estimates
plot LRR, BAF, and the copy number estimates of genoCNV and/or PennCNV.
● Data Source:
BioConductor
● Keywords: methods
● Alias: plotCN
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1 images
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