R Graphical Manual

Last data update: 2014.03.03

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R Release (3.2.3)
CranContrib
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Classification

Results 1 - 10 of 11 found.
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mcia (Package: omicade4) : multiple co-inertia analysis

The main function in omicade4. Performing multiple co-inertia analysis on a list of data.frames or matrix

● Data Source: BioConductor
● Keywords: mcia
● Alias: mcia, plot.mcia
● 2 images

omicade4-package (Package: omicade4) :

The main function in the package performing multiple co-inertia analysis on omics datasets

● Data Source: BioConductor
● Keywords: multivariate
● Alias: omicade4, omicade4-package
● 0 images

plotVar (Package: omicade4) :

The user level function for plotting variable space of mcia or cia, which could be used to visualize selected variables (genes) across datasets. It calls plotVar.cia or plotVar.mcia.

● Data Source: BioConductor
● Keywords:
● Alias: plotVar
● 3 images

plotVar.cia (Package: omicade4) :

Plot variable space of mcia and visualize selected variables across datasets.

● Data Source: BioConductor
● Keywords:
● Alias: plotVar.cia
● 0 images

plotVar.mcia (Package: omicade4) :

Plot variable space of mcia and visualize selected variables across datasets, the function is called by plotVar.

● Data Source: BioConductor
● Keywords:
● Alias: plotVar.mcia
● 3 images

selectVar (Package: omicade4) :

The user level function calls selectVar.mcia or selectVar.cia. Function cia or mcia projects variables (genes) from different datasets to a 2 dimensional space. This function supplies a method selecting variables (genes) according to the coordinates of variables

● Data Source: BioConductor
● Keywords:
● Alias: selectVar
● 0 images

selectVar.cia (Package: omicade4) :

To select variables in CIA variable space, the function is called by selectVar.

● Data Source: BioConductor
● Keywords:
● Alias: selectVar.cia
● 0 images

selectVar.mcia (Package: omicade4) :

The selection of variables based on co-ordinates of MCIA variable space. The function is called by selectVar

● Data Source: BioConductor
● Keywords:
● Alias: selectVar.mcia
● 0 images

topVar (Package: omicade4) :

The user level function calls topVar.mcia or topVar.cia. This function provides a method selecting top weighted variables (genes) on an axis (either positive side or negative side or both).

● Data Source: BioConductor
● Keywords:
● Alias: topVar
● 0 images

topVar.cia (Package: omicade4) :

This function provides a method selecting top weighted variables (genes) on an axis (either positive side or negative side or both) from an object of class cia (see made4 package).

● Data Source: BioConductor
● Keywords:
● Alias: topVar.cia
● 0 images