Last data update: 2014.03.03
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ArrayTV
Package: ArrayTV
Version: 1.10.0
Title: Implementation of wave correction for arrays
Date: Thu Sep 19 10:45:22 EDT 2013
Author: Eitan Halper-Stromberg
Maintainer: Eitan Halper-Stromberg <Eitan177@gmail.com>
Description: Wave correction for genotyping and copy number arrays
License: GPL (>= 2)
LazyLoad: yes
Depends: R (>= 2.14)
Imports: methods, foreach, S4Vectors (>= 0.9.25), DNAcopy, oligoClasses
(>= 1.21.3)
Suggests: RColorBrewer, crlmm, ff,
BSgenome.Hsapiens.UCSC.hg18, BSgenome.Hsapiens.UCSC.hg19,
lattice, latticeExtra, RUnit, BiocGenerics
Enhances: doMC, doSNOW, doParallel
Collate: AllGenerics.R calctvScore.R computeGC.R correctionTVscore.R
CorrectM.R gcCorrectMain.R gcFracAllWin.R gcFracOneRange.R
getGCinBestWindowGenome.R methods-gcCorrect.R priorFracs.R
priorFracsRestOfGenome.R
biocViews: CopyNumberVariation
NeedsCompilation: no
Packaged: 2016-05-04 05:04:54 UTC; biocbuild
● BiocViews: CopyNumberVariation
●
0 images,
4 functions,
0 datasets
●
Reverse Depends: 0
Install log
* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'ArrayTV' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
converting help for package 'ArrayTV'
finding HTML links ... done
ArrayTV-package html
gcCorrect-methods html
finding level-2 HTML links ... done
gcCorrectMain html
methods-computeGC html
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (ArrayTV)
Making 'packages.html' ... done
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