Last data update: 2014.03.03

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Results 1 - 8 of 8 found.
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NPCD : Nonparametric Methods for Cognitive Diagnosis

Package: NPCD
Type: Package
Version: 1.0-9
Date: 2015-10-2
Title: Nonparametric Methods for Cognitive Diagnosis
Authors@R: c(person("Yi", "Zheng", role = c("aut", "cre"), email = "yi.isabel.zheng@asu.edu"), person("Chia-Yi", "Chiu", role = "aut"), person("Jeffrey A.", "Douglas", role = "ctb", email = "jeffdoug@illinois.edu"))
Maintainer: Yi Zheng <yi.isabel.zheng@asu.edu>
Description: An array of nonparametric and parametric estimation methods for cognitive diagnostic models, including nonparametric classification of examinee attribute profiles, joint maximum likelihood estimation (JMLE) of examinee attribute profiles and item parameters, and nonparametric refinement of the Q-matrix, as well as conditional maximum likelihood estimation (CMLE) of examinee attribute profiles given item parameters and CMLE of item parameters given examinee attribute profiles. Currently the nonparametric methods in the package support both conjunctive and disjunctive models, and the parametric methods in the package support the DINA model, the DINO model, the NIDA model, the G-NIDA model, and the R-RUM model.
Depends: R (>= 2.14.2), BB, R.oo
Imports: R.methodsS3
LazyLoad: yes
LazyData: yes
License: LGPL (>= 2.1)
Repository: CRAN
NeedsCompilation: no
Packaged: 2015-10-03 16:44:32 UTC; Isabelle
Author: Yi Zheng [aut, cre],
Chia-Yi Chiu [aut],
Jeffrey A. Douglas [ctb]
Date/Publication: 2015-10-03 19:41:04

● Data Source: CranContrib
4 images, 11 functions, 3 datasets
● Reverse Depends: 0

NSA : Post-normalization of total copy numbers

Package: NSA
Version: 0.0.32
Date: 2012-12-20
Title: Post-normalization of total copy numbers
Author: Maria Ortiz-Estevez <mortizest@gmail.com>, Ander Aranburu
<aaranburu@ceit.es>, Angel Rubio <arubio@ceit.es>
Maintainer: Maria Ortiz-Estevez <mortizest@gmail.com>
Depends: R (>= 2.11.1), R.methodsS3 (>= 1.2.0), MASS, matrixStats (>=
0.2.1), R.oo (>= 1.7.3), R.utils (>= 1.4.2), aroma.core (>=
1.6.0), aroma.affymetrix, DNAcopy
Description: Post-normalization of total copy-number estimates.
License: LGPL (>= 2.1)
URL: http://r-forge.r-project.org/projects/snpsprocessing/
LazyLoad: TRUE
biocViews: Infrastructure, Microarray, DNACopyNumber, Preprocessing,
aCGH, SNP, CopyNumberVariants
Repository: CRAN
Repository/R-Forge/Project: snpsprocessing
Repository/R-Forge/Revision: 202
Repository/R-Forge/DateTimeStamp: 2012-12-20 19:24:38
Date/Publication: 2012-12-21 09:17:05
Packaged: 2012-12-20 23:15:21 UTC; rforge

● Data Source: CranContrib
● BiocViews: CopyNumberVariants, DNACopyNumber, Infrastructure, Microarray, Preprocessing, SNP, aCGH
● 0 images, 11 functions, 0 datasets
● Reverse Depends: 0

R.filesets : Easy Handling of and Access to Files Organized in Structured Directories

Package: R.filesets
Version: 2.10.0
Depends: R (>= 3.1.2), R.oo (>= 1.19.0)
Imports: digest (>= 0.6.8), future (>= 0.10.0), listenv (>= 0.6.0),
R.methodsS3 (>= 1.7.0), R.utils (>= 2.2.0), R.cache (>=
0.12.0), stats
Suggests: BatchJobs (>= 1.6), BiocParallel (>= 1.0.3), gtools (>=
3.5.0)
SuggestsNote: BioC (>= 3.0), Recommended: gtools
Date: 2016-01-04
Title: Easy Handling of and Access to Files Organized in Structured
Directories
Authors@R: c(person("Henrik", "Bengtsson", role=c("aut", "cre", "cph"),
email = "henrikb@braju.com"))
Author: Henrik Bengtsson [aut, cre, cph]
Maintainer: Henrik Bengtsson <henrikb@braju.com>
Description: A file set refers to a set of files located in one or more directories on the file system. This package provides classes and methods to locate, setup, subset, navigate and iterate such sets. The API is designed such that these classes can be extended via inheritance to provide a richer API for special file formats. Moreover, a specific name format is defined such that filenames and directories can be considered to have full names which consists of a name followed by comma-separated tags. This adds additional flexibility to identify file sets and individual files. NOTE: This package's API should be considered to be in an beta stage. Its main purpose is currently to support the aroma.* packages, where it is one of the main core components; if you decide to build on top of this package, please contact the author first.
License: LGPL (>= 2.1)
URL: https://github.com/HenrikBengtsson/R.filesets,
http://www.aroma-project.org/
BugReports: https://github.com/HenrikBengtsson/R.filesets/issues
LazyLoad: TRUE
biocViews: Infrastructure, DataImport, DataRepresentation
NeedsCompilation: no
Packaged: 2016-01-04 23:36:06 UTC; hb
Repository: CRAN
Date/Publication: 2016-01-05 07:03:05

● Data Source: CranContrib
● BiocViews: DataImport, DataRepresentation, Infrastructure
● 0 images, 98 functions, 0 datasets
Reverse Depends: 1

R.utils : Various Programming Utilities

Package: R.utils
Version: 2.3.0
Depends: R (>= 2.14.0), R.oo (>= 1.19.0)
Imports: methods, utils, tools, R.methodsS3 (>= 1.7.0)
Suggests: digest (>= 0.6.8)
Date: 2016-04-13
Title: Various Programming Utilities
Authors@R: c(person("Henrik", "Bengtsson", role=c("aut", "cre", "cph"),
email = "henrikb@braju.com"))
Author: Henrik Bengtsson [aut, cre, cph]
Maintainer: Henrik Bengtsson <henrikb@braju.com>
Description: Utility functions useful when programming and developing R packages.
License: LGPL (>= 2.1)
LazyLoad: TRUE
URL: https://github.com/HenrikBengtsson/R.utils
BugReports: https://github.com/HenrikBengtsson/R.utils/issues
NeedsCompilation: no
Packaged: 2016-04-14 05:13:44 UTC; hb
Repository: CRAN
Date/Publication: 2016-04-14 08:32:22

● Data Source: CranContrib
2 images, 280 functions, 0 datasets
Reverse Depends: 10

curvetest : The package will formally test two curves represented by discrete data sets to be statistically equal or not when the errors of the two curves were assumed either equal or not using the tube formula to calculate the tail probabilities.

Package: curvetest
Type: Package
Title: The package will formally test two curves represented by
discrete data sets to be statistically equal or not when the
errors of the two curves were assumed either equal or not using
the tube formula to calculate the tail probabilities.
Version: 2.2
Date: 2012-03-1
Author: Zhongfa Zhang
Maintainer: Zhongfa Zhang<zjz999@gmail.com>
Description: Test Equality of Curves with Homoscedastic or
Heteroscedastic Errors.
License: GPL-2
LazyLoad: yes
Depends: locfit, R.oo, methods, R.methodsS3
Packaged: 2012-03-01 17:24:07 UTC; jacob
Repository: CRAN
Date/Publication: 2012-03-01 18:12:41

● Data Source: CranContrib
● 0 images, 6 functions, 0 datasets
● Reverse Depends: 0

CellularAutomaton : One-Dimensional Cellular Automata

Package: CellularAutomaton
Type: Package
Title: One-Dimensional Cellular Automata
Version: 1.1-1
Date: 2013-08-19
Author: John Hughes
Maintainer: John Hughes <hughesj@umn.edu>
Depends: R.oo, R.methodsS3
Description: This package is an object-oriented implementation of one-dimensional cellular automata. It supports many of the features offered by Mathematica, including elementary rules, user-defined rules, radii, user-defined seeding, and plotting.
License: GPL
Packaged: 2013-08-20 00:22:37 UTC; jphughesjr
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2013-08-20 07:01:00

● Data Source: CranContrib
● Cran Task View: ChemPhys
4 images, 16 functions, 0 datasets
● Reverse Depends: 0

DATforDCEMRI : Deconvolution Analysis Tool for Dynamic Contrast Enhanced MRI

Package: DATforDCEMRI
Type: Package
Title: Deconvolution Analysis Tool for Dynamic Contrast Enhanced MRI
Version: 0.55
Date: 2013-03-19
Author: Gregory Z. Ferl
Maintainer: Gregory Z. Ferl <ferl.gregory@gene.com>
Depends: R (>= 2.11.0), xtable, akima, R.oo, R.methodsS3, matlab,
lattice, locfit, graphics, grDevices, grid
Suggests: R.matlab
Description: This package performs voxel-wise deconvolution analysis of
DCE-MRI contrast agent concentration versus time data and
generates the Impulse Response Function, which can be used to
approximate commonly utilized kinetic parameters such as Ktrans
and ve. An interactive advanced voxel diagnosis tool (AVDT) is
also provided to facilitate easy navigation of voxel-wise data.
License: CC BY-NC-SA 3.0
LazyLoad: yes
LazyData: yes
Packaged: 2013-03-20 03:28:49 UTC; ferlg
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2013-03-20 07:49:01

● Data Source: CranContrib
● 0 images, 4 functions, 0 datasets
● Reverse Depends: 0

plmDE : Additive partially linear models for differential gene expression analysis

Package: plmDE
Type: Package
Title: Additive partially linear models for differential gene
expression analysis
Version: 1.0
Date: 2012-05-01
Author: Jonas Mueller
Maintainer: Jonas <jonasmueller303@hotmail.com>
Depends: R (>= 2.14.2), MASS, splines, limma, R.oo
Suggests: Biobase, edgeR, DESeq
Description: A set of tools for identifying genes whose differential
expression is associated with measurements of other covariates
on a continuous scale. These methods rely on generalized
additive partially linear models which can be fitted
efficiently using a B-spline basis approximation. Still under
development: methods for interfacing with objects extending the
eSet class and a function to pass linear models in edgeR and
DEseq format.
License: GPL (>= 2)
Packaged: 2012-05-09 00:37:12 UTC; jonasmueller
Repository: CRAN
Date/Publication: 2012-05-09 04:06:58

● Data Source: CranContrib
● 0 images, 13 functions, 0 datasets
● Reverse Depends: 0