Package: lba
Title: Latent Budget Analysis for Compositional Data
Version: 1.2
Date: 2015-06-25
Author: Enio G. Jelihovschi <eniojelihovs@gmail.com> and
Ivan Bezerra Allaman <ivanalaman@gmail.com>
Maintainer: Enio G. Jelihovschi <eniojelihovs@gmail.com>
Depends: R (>= 3.1.2), MASS, alabama, plotrix, ca
Description: Latent budget analysis is a method for the analysis of a two-way contingency table with an exploratory variable and a response variable. It is specially designed for compositional data.
Encoding: latin1
License: GPL (>= 2)
NeedsCompilation: no
Packaged: 2015-06-25 23:34:06 UTC; ivan
Repository: CRAN
Date/Publication: 2015-06-27 00:46:51
Package: DIFtree
Type: Package
Title: Item Focused Trees for the Identification of Items in
Differential Item Functioning
Version: 2.0.2
Date: 2016-04-21
Author: Moritz Berger
Depends: penalized, plotrix
Maintainer: Moritz Berger <moritz.berger@stat.uni-muenchen.de>
Description: Item focused recursive partitioning for simultaneous selection of
items and variables that induce Differential Item Functioning (DIF) based on the
Rasch Model or the Logistic Regression Approach for DIF detection.
License: GPL-2
LazyLoad: yes
RoxygenNote: 5.0.0
NeedsCompilation: no
Packaged: 2016-04-21 13:01:45 UTC; bergerm
Repository: CRAN
Date/Publication: 2016-04-22 13:09:47
Package: SeqFeatR
Type: Package
Title: A Tool to Associate FASTA Sequences and Features
Version: 0.2.3
Date: 2016-05-25
Author: Bettina Budeus
Maintainer: Bettina Budeus <bettina.budeus@stud.uni-due.de>
Depends: R (>= 3.2.2), tcltk, tcltk2, Biostrings, plotrix
Imports: plyr, phangorn, qvalue, widgetTools, calibrate, ggplot2, R2jags, coda, scales, ape
Suggests: xtable
Description: Provides user friendly methods for the identification of sequence patterns that are statistically significantly associated with a property of the sequence. For instance, SeqFeatR allows to identify viral immune escape mutations for hosts of given HLA types. The underlying statistical method is Fisher's exact test, with appropriate corrections for multiple testing, or Bayes. Patterns may be point mutations or n-tuple of mutations. SeqFeatR offers several ways to visualize the results of the statistical analyses.
License: GPL (>= 3)
NeedsCompilation: no
Packaged: 2016-05-25 06:27:35 UTC; bb
Repository: CRAN
Date/Publication: 2016-05-25 11:17:12
Package: GeneticTools
Type: Package
Title: Collection of Genetic Data Analysis Tools
Version: 0.3.1
Date: 2015-02-04
Author: Daniel Fischer
Maintainer: Daniel Fischer <daniel.fischer@luke.fi>
Depends: R (>= 3.0.2), gMWT (>= 0.3), snpStats, Rcpp (>= 0.9.13), plotrix
LinkingTo: Rcpp, RcppArmadillo
Description: A loose collection of tools for the analysis of gene expression and genotype data, currently with main focus on eQTL and MDR analysis.
License: GPL (>= 2)
Packaged: 2015-02-04 10:03:09 UTC; medafi
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2015-02-04 13:12:25
Package: SPEDInstabR
Version: 1.0
Date: 2016-06-23
Title: Estimation of the Relative Importance of Factors Affecting
Species Distribution Based on Stability Concept
Author: Cástor Guisande González
Maintainer: Cástor Guisande González <castor@uvigo.es>
Description: From output files obtained from the software ModestR, the relative contribution of factors to explain species distribution is depicted using several plots. A global geographic raster file for each environmental variable may be also obtained with the mean relative contribution, considering all species present in each raster cell, of the factor to explain species distribution. Finally, for each variable it is also possible to compare the frequencies of any variable obtained in the cells where the species is present with the frequencies of the same variable in the cells of the extent.
License: GPL (>= 2)
Encoding: latin1
Depends: R (>= 3.1.1), beanplot, raster, plotrix, TeachingDemos
Repository: CRAN
Packaged: 2016-06-23 20:23:34 UTC; castor
NeedsCompilation: no
Date/Publication: 2016-06-25 19:07:30
providing 
.