R Graphical Manual

Last data update: 2014.03.03

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Results 1 - 3 of 3 found.
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domainsignatures : Geneset enrichment based on InterPro domain signatures

Package: domainsignatures
Type: Package
Title: Geneset enrichment based on InterPro domain signatures
Version: 1.32.0
Author: Florian Hahne, Tim Beissbarth
Maintainer: Florian Hahne <florian.hahne@novartis.com>
Description: Find significantly enriched gene classifications in a list of functionally undescribed genes based on their InterPro domain structure.
Depends: R (>= 2.4.0), KEGG.db, prada, biomaRt, methods
Imports: AnnotationDbi
License: Artistic-2.0
Collate: AllClasses.R methods-ipDataSource.R getKEGGdata.R sage.test.R
compSimilarities.R sim2Pathway.R getKEGGdescription.R
resampleGeneLists.R dataSource.R gseDomain.R
LazyLoad: yes
biocViews: Annotation, Pathways, GeneSetEnrichment
NeedsCompilation: no
Packaged: 2016-05-05 01:59:43 UTC; biocbuild

● Data Source: BioConductor
● BiocViews: Annotation, GeneSetEnrichment, Pathways
● 0 images, 6 functions, 0 datasets
● Reverse Depends: 0

RNAither : Statistical analysis of high-throughput RNAi screens

Package: RNAither
Title: Statistical analysis of high-throughput RNAi screens
Version: 2.20.0
Author: Nora Rieber and Lars Kaderali, University of Heidelberg,
Viroquant Research Group Modeling, Im Neuenheimer Feld 267,
69120 Heidelberg, Germany
Maintainer: Lars Kaderali <lars.kaderali@uni-greifswald.de>
Depends: R (>= 2.10), topGO, RankProd, prada
Imports: geneplotter, limma, biomaRt, car, splots, methods
Description: RNAither analyzes cell-based RNAi screens, and includes
quality assessment, customizable normalization and statistical
tests, leading to lists of significant genes and biological
processes.
License: Artistic-2.0
biocViews: CellBasedAssays, QualityControl, Preprocessing,
Visualization, Annotation, GO
NeedsCompilation: no
Packaged: 2016-05-05 01:59:59 UTC; biocbuild

● Data Source: BioConductor
● BiocViews: Annotation, CellBasedAssays, GO, Preprocessing, QualityControl, Visualization
● 3 images, 83 functions, 8 datasets
● Reverse Depends: 0

facsDorit : DKFZ FACS example data

Package: facsDorit
Version: 1.14.0
Date: 2006-06-08
Title: DKFZ FACS example data
Author: Florian Hahne <f.hahne@dfkz-heidelberg.de>
Depends: R (>= 1.9.1), prada (>= 1.0.5)
Maintainer: Florian Hahne <f.hahne@dfkz-heidelberg.de>
Description: FACS example data for cell-based assays. This data is used in the examples and vignettes of the package prada.
License: GPL-2
URL: http://www.dkfz.de/mga
biocViews: ExperimentData, MicrotitrePlateAssayData
NeedsCompilation: no
Packaged: 2016-05-07 20:10:46 UTC; biocbuild

● Data Source: BioConductor
● BiocViews: ExperimentData, MicrotitrePlateAssayData
● 0 images, 1 functions, 0 datasets
● Reverse Depends: 0