R Graphical Manual

Last data update: 2014.03.03

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R Release (3.2.3)
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Classification

Results 1 - 10 of 27 found.
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GenomeInfo-class (Package: waveTiling) : Class "genomeInfo"

class to store the genomic info from a WfmFit-class object

● Data Source: BioConductor
● Keywords: classes
● Alias: GenomeInfo, GenomeInfo-class, initialize,GenomeInfo-method, show,GenomeInfo-method
● 0 images

MapFilterProbe-class (Package: waveTiling) : Class "MapFilterProbe"

class to store probe information after remapping and/or filtering of probes.

● Data Source: BioConductor
● Keywords: classes
● Alias: MapFilterProbe, MapFilterProbe-class, getChromosome, getChromosome,MapFilterProbe-method, getFilteredIndices, getFilteredIndices,MapFilterProbe-method, getPosition, getPosition,MapFilterProbe-method, getStrand, getStrand,MapFilterProbe-method, initialize,MapFilterProbe-method, selectProbesFromFilterOverlap,MapFilterProbe-method, show,MapFilterProbe-method
● 0 images

WaveTilingFeatureSet-class (Package: waveTiling) : Class "WaveTilingFeatureSet"

Class to store expression and phenotypic data from a tiling array experiment, used as input for the wavelet-based transcriptome analysis.

● Data Source: BioConductor
● Keywords: classes
● Alias: WaveTilingFeatureSet, WaveTilingFeatureSet-class, initialize,WaveTilingFeatureSet-method, show,WaveTilingFeatureSet-method
● 0 images

WfmFit-class (Package: waveTiling) : Class "WfmFit"

class to store model fits in the wavelet-based transcriptome analysis.

● Data Source: BioConductor
● Keywords: classes
● Alias: WfmFit, WfmFit-class, getBetaWav, getBetaWav,WfmFit-method, getChromosome,WfmFit-method, getDataOrigSpace, getDataOrigSpace,WfmFit-method, getDataWaveletSpace, getDataWaveletSpace,WfmFit-method, getDesignMatrix, getDesignMatrix,WfmFit-method, getF, getF,WfmFit-method, getGenomeInfo, getGenomeInfo,WfmFit-method, getKj, getKj,WfmFit-method, getMaxPos, getMaxPos,WfmFit-method, getMinPos, getMinPos,WfmFit-method, getNoLevels, getNoLevels,WfmFit-method, getNoProbes, getNoProbes,WfmFit-method, getPhenoInfo, getPhenoInfo,WfmFit-method, getPrior, getPrior,WfmFit-method, getProbePosition, getProbePosition,WfmFit-method, getSmoothPar, getSmoothPar,WfmFit-method, getStrand,WfmFit-method, getVarBetaWav, getVarBetaWav,WfmFit-method, getVarEps, getVarEps,WfmFit-method, getVarF, getVarF,WfmFit-method, getWaveletFilter, getWaveletFilter,WfmFit-method, initialize,WfmFit-method, show,WfmFit-method, wfm.inference,WfmFit-method
● 0 images

WfmFitCircadian-class (Package: waveTiling) : Class "WfmFitCircadian"

class to store model fits with a circadian rhythm design in the wavelet-based transcriptome analysis.

● Data Source: BioConductor
● Keywords: classes
● Alias: WfmFitCircadian, WfmFitCircadian-class, initialize,WfmFitCircadian-method, show,WfmFitCircadian-method
● 0 images

WfmFitCustom-class (Package: waveTiling) : Class "WfmFitCustom"

class to store model fits with custom design in the wavelet-based transcriptome analysis.

● Data Source: BioConductor
● Keywords: classes
● Alias: WfmFitCustom, WfmFitCustom-class, initialize,WfmFitCustom-method, show,WfmFitCustom-method
● 0 images

WfmFitFactor-class (Package: waveTiling) : Class "WfmFitFactor"

class to store model fits with factorial design in the wavelet-based transcriptome analysis.

● Data Source: BioConductor
● Keywords: classes
● Alias: WfmFitFactor, WfmFitFactor-class, initialize,WfmFitFactor-method, show,WfmFitFactor-method
● 0 images

WfmFitTime-class (Package: waveTiling) : Class "WfmFitTime"

class to store model fits with a time-course design in the wavelet-based transcriptome analysis.

● Data Source: BioConductor
● Keywords: classes
● Alias: WfmFitTime, WfmFitTime-class, initialize,WfmFitTime-method, show,WfmFitTime-method
● 0 images

WfmInf-class (Package: waveTiling) : Class "WfmInf"

class to store outputs from the inference in the wavelet-based transcriptome analysis.

● Data Source: BioConductor
● Keywords: classes
● Alias: WfmInf, WfmInf-class, getAlpha, getAlpha,WfmInf-method, getDelta, getDelta,WfmInf-method, getEff, getEff,WfmInf-method, getFDR, getFDR,WfmInf-method, getGenomeInfo,WfmInf-method, getGenomicRegions, getGenomicRegions,WfmInf-method, getNonAnnotatedRegions,WfmFit,WfmInf-method, getRegions, getRegions,WfmInf-method, getSigGenes,WfmFit,WfmInf-method, getSigProbes, getSigProbes,WfmInf-method, getTwoSided, getTwoSided,WfmInf-method, getVarEff, getVarEff,WfmInf-method, initialize,WfmInf-method, plotWfm,WfmFit,WfmInf-method, show,WfmInf-method
● 0 images

WfmInfCompare-class (Package: waveTiling) : Class "WfmInfCompare"

class to store outputs from the inference for a pairwise comparison wavelet-based transcriptome analysis.

● Data Source: BioConductor
● Keywords: classes
● Alias: WfmInfCompare, WfmInfCompare-class, initialize,WfmInfCompare-method, show,WfmInfCompare-method
● 0 images