R Graphical Manual

Last data update: 2014.03.03

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Results 1 - 9 of 9 found.
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PPA.liver (Package: iBMQ) :

The result is a matrix with Posterior Probabilities of Association for each gene (row) and SNP (column). The PPA matrix was previously calculated with 100,000 iterations for liver tissue from n = 60 F2 mice dataset

● Data Source: BioConductor
● Keywords: datasets
● Alias: PPA.liver
● 0 images

gene (Package: iBMQ) :

This dataset comprises the profiles of mRNA abundance in whole eye tissue from n = 68 BXD RIS mice, as measured using Affymetrix M430 2.0 microarrays. To ease calculation and facilitate comparisons, we will use a set of G = 1000 probes

● Data Source: BioConductor
● Keywords: datasets
● Alias: gene
● 0 images

genepos (Package: iBMQ) :

A data frame specifying the genomic locations of each gene/probe needs to be prepared with the following columns: gene name, chromosome number, start location (in base pairs) and the location (in base pairs).

● Data Source: BioConductor
● Keywords: datasets
● Alias: genepos
● 0 images

genotype.liver (Package: iBMQ) :

A set of 290 single nucleotide polymorphic markers (SNPs) from 60 F2 mice.

● Data Source: BioConductor
● Keywords: datasets
● Alias: genotype.liver
● 0 images

map.liver (Package: iBMQ) :

A data frame specifying the genomic locations of each SNP with following columns: SNP name, chromosome number, SNP location (in base pair).

● Data Source: BioConductor
● Keywords: datasets
● Alias: map.liver
● 0 images

phenotype.liver (Package: iBMQ) :

Gene expression of 5000 probe from liver tissue from n = 60 F2 mice.

● Data Source: BioConductor
● Keywords: datasets
● Alias: phenotype.liver
● 0 images

probe.liver (Package: iBMQ) :

● Data Source: BioConductor
● Keywords: datasets
● Alias: probe.liver
● 0 images

snp (Package: iBMQ) :

A set of 1700 single nucleotide polymorphic markers (SNPs) from 68 BXD RIS mice.

● Data Source: BioConductor
● Keywords: datasets
● Alias: snp
● 0 images

snppos (Package: iBMQ) :

A data frame specifying the genomic locations of each SNP with following columns: SNP name, chromosome number, SNP location (in base pair).

● Data Source: BioConductor
● Keywords: datasets
● Alias: snppos
● 0 images