array2ade4
(Package: made4) :
Converts microarray input data into a data frame suitable for analysis
Converts input data into a data.frame suitable for analysis in ADE4. This function is called by bga and other made4 function.
● Data Source:
BioConductor
● Keywords: manip
● Alias: array2ade4
●
0 images
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bet.coinertia
(Package: made4) :
Between class coinertia analysis
Between class coinertia analysis. cia of 2 datasets where covariance between groups or classes of cases, rather than individual cases are maximised.
● Data Source:
BioConductor
● Keywords: manip, multivariate
● Alias: bet.coinertia
●
0 images
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between.graph
(Package: made4) :
Plot 1D graph of results from between group analysis
Plots a 1D graph, of results of between group analysis similar to that in Culhane et al., 2002.
● Data Source:
BioConductor
● Keywords: hplot, multivariate
● Alias: between.graph
●
3 images
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bga
(Package: made4) :
Between group analysis
Discrimination of samples using between group analysis as described by Culhane et al., 2002.
● Data Source:
BioConductor
● Keywords: manip, multivariate
● Alias: bga, plot.bga
●
2 images
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bga.jackknife
(Package: made4) :
Jackknife between group analysis
Performs one-leave-out jackknife analysis of a between group analysis as described by Culhane et al., 20002
● Data Source:
BioConductor
● Keywords: manip, multivariate
● Alias: bga.jackknife
●
0 images
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bga.suppl
(Package: made4) :
Between group analysis with supplementary data projection
bga.suppl performs a bga between group analysis with projection of supplementary points using suppl
● Data Source:
BioConductor
● Keywords: manip, multivariate
● Alias: bga.suppl
●
1 images
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checkfac
(Package: made4) :
Check factor
Convert input vector into a factor suitable for analysis in ADE4. This function is called by link[made4:bga]{bga} and other made4 function, it is not normally called by the user
● Data Source:
BioConductor
● Keywords: internal
● Alias: checkfac
●
0 images
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chime3D
(Package: made4) :
Produce web graph of 3D graph that can be viewed using Chime web browser plug-in from a pdb file
chime3D produces a html web page with a 3D graph of a pdb file that can be rotated and manipulated in a web browser that supports the chime plug-in.
● Data Source:
BioConductor
● Keywords: internal
● Alias: chime3D
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0 images
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cia
(Package: made4) :
Coinertia analysis: Explore the covariance between two datasets
Performs CIA on two datasets as described by Culhane et al., 2003. Used for meta-analysis of two or more datasets.
● Data Source:
BioConductor
● Keywords: hplot, multivariate
● Alias: cia, plot.cia
●
2 images
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commonMap
(Package: made4) :
Highlight common points between two 1D plots
CommonMap draws two 1D plots, and links the common points between the two.
● Data Source:
BioConductor
● Keywords: hplot, multivariate
● Alias: commonMap
●
1 images
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