lumiRatAllGO
(Package: lumiRatAll.db) :
Maps between manufacturer IDs and Gene Ontology (GO) IDs
lumiRatAllGO is an R object that provides mappings between manufacturer identifiers and the GO identifiers that they are directly associated with. This mapping and its reverse mapping (lumiRatAllGO2PROBE) do NOT associate the child terms from the GO ontology with the gene. Only the directly evidenced terms are represented here.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: lumiRatAllGO, lumiRatAllGO2ALLPROBES, lumiRatAllGO2PROBE
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lumiRatAllMAPCOUNTS
(Package: lumiRatAll.db) :
Number of mapped keys for the maps in package lumiRatAll.db
lumiRatAllMAPCOUNTS provides the "map count" (i.e. the count of mapped keys) for each map in package lumiRatAll.db.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: lumiRatAllMAPCOUNTS
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lumiRatAllORGANISM is an R object that contains a single item: a character string that names the organism for which lumiRatAll was built. lumiRatAllORGPKG is an R object that contains a chararcter vector with the name of the organism package that a chip package depends on for its gene-centric annotation.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: lumiRatAllORGANISM, lumiRatAllORGPKG
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lumiRatAllPATH
(Package: lumiRatAll.db) :
Mappings between probe identifiers and KEGG pathway identifiers
KEGG (Kyoto Encyclopedia of Genes and Genomes) maintains pathway data for various organisms.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: lumiRatAllPATH, lumiRatAllPATH2PROBE
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lumiRatAllPFAM is an R object that provides mappings between a manufacturer identifier and the associated Pfam identifiers.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: lumiRatAllPFAM
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lumiRatAllPMID
(Package: lumiRatAll.db) :
Maps between Manufacturer Identifiers and PubMed Identifiers
lumiRatAllPMID is an R object that provides mappings between manufacturer identifiers and PubMed identifiers. lumiRatAllPMID2PROBE is an R object that provides mappings between PubMed identifiers and manufacturer identifiers.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: lumiRatAllPMID, lumiRatAllPMID2PROBE
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lumiRatAllPROSITE is an R object that provides mappings between a manufacturer identifier and the associated PROSITE identifiers.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: lumiRatAllPROSITE
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lumiRatAllREFSEQ
(Package: lumiRatAll.db) :
Map between Manufacturer Identifiers and RefSeq Identifiers
lumiRatAllREFSEQ is an R object that provides mappings between manufacturer identifiers and RefSeq identifiers.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: lumiRatAllREFSEQ
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lumiRatAllSYMBOL
(Package: lumiRatAll.db) :
Map between Manufacturer Identifiers and Gene Symbols
lumiRatAllSYMBOL is an R object that provides mappings between manufacturer identifiers and gene abbreviations.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: lumiRatAllSYMBOL
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lumiRatAllUNIGENE
(Package: lumiRatAll.db) :
Map between Manufacturer Identifiers and UniGene cluster identifiers
lumiRatAllUNIGENE is an R object that provides mappings between manufacturer identifiers and UniGene identifiers.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: lumiRatAllUNIGENE
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