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Last data update: 2014.03.03

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Results 71 - 80 of 27352 found.
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illuminaRatv1GO (Package: illuminaRatv1.db) : Maps between manufacturer IDs and Gene Ontology (GO) IDs

illuminaRatv1GO is an R object that provides mappings between manufacturer identifiers and the GO identifiers that they are directly associated with. This mapping and its reverse mapping (illuminaRatv1GO2PROBE) do NOT associate the child terms from the GO ontology with the gene. Only the directly evidenced terms are represented here.

● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaRatv1GO, illuminaRatv1GO2ALLPROBES, illuminaRatv1GO2PROBE
● 0 images

illuminaRatv1MAPCOUNTS (Package: illuminaRatv1.db) : Number of mapped keys for the maps in package illuminaRatv1.db

illuminaRatv1MAPCOUNTS provides the "map count" (i.e. the count of mapped keys) for each map in package illuminaRatv1.db.

● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaRatv1MAPCOUNTS
● 0 images

illuminaRatv1listNewMappings (Package: illuminaRatv1.db) : Custom mappings added to the package

We have used an extensive re-annotation of the illuminaRatv1 probe sequences to provide additional information that is not captured in the standard Bioconductor packages. Whereas Bioconductor annotations are based on the RefSeq ID that each probe maps to, our additional mappings provide data specific to each probe on the platform. See below for details. We recommend using the probe quality as a form of filtering, and retaining only perfect or good probes for an analysis.

● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaRatv1ARRAYADDRESS, illuminaRatv1CODINGZONE, illuminaRatv1ENSEMBLREANNOTATED, illuminaRatv1ENTREZREANNOTATED, illuminaRatv1GENOMICLOCATION, illuminaRatv1GENOMICMATCHSIMILARITY, illuminaRatv1NUID, illuminaRatv1OTHERGENOMICMATCHES, illuminaRatv1OVERLAPPINGSNP, illuminaRatv1PROBEQUALITY, illuminaRatv1PROBESEQUENCE, illuminaRatv1REPEATMASK, illuminaRatv1REPORTERGROUPID, illuminaRatv1REPORTERGROUPNAME, illuminaRatv1SECONDMATCHES, illuminaRatv1SECONDMATCHSIMILARITY, illuminaRatv1SYMBOLREANNOTATED, illuminaRatv1TRANSCRIPTOMICMATCHSIMILARITY, illuminaRatv1fullReannotation, illuminaRatv1listNewMappings
● 0 images

illuminaRatv1ORGANISM (Package: illuminaRatv1.db) : The Organism information for illuminaRatv1

illuminaRatv1ORGANISM is an R object that contains a single item: a character string that names the organism for which illuminaRatv1 was built. illuminaRatv1ORGPKG is an R object that contains a chararcter vector with the name of the organism package that a chip package depends on for its gene-centric annotation.

● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaRatv1ORGANISM, illuminaRatv1ORGPKG
● 0 images

illuminaRatv1PATH (Package: illuminaRatv1.db) : Mappings between probe identifiers and KEGG pathway identifiers

KEGG (Kyoto Encyclopedia of Genes and Genomes) maintains pathway data for various organisms.

● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaRatv1PATH, illuminaRatv1PATH2PROBE
● 0 images

illuminaRatv1PMID (Package: illuminaRatv1.db) : Maps between Manufacturer Identifiers and PubMed Identifiers

illuminaRatv1PMID is an R object that provides mappings between manufacturer identifiers and PubMed identifiers. illuminaRatv1PMID2PROBE is an R object that provides mappings between PubMed identifiers and manufacturer identifiers.

● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaRatv1PMID, illuminaRatv1PMID2PROBE
● 0 images

illuminaRatv1REFSEQ (Package: illuminaRatv1.db) : Map between Manufacturer Identifiers and RefSeq Identifiers

illuminaRatv1REFSEQ is an R object that provides mappings between manufacturer identifiers and RefSeq identifiers.

● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaRatv1REFSEQ
● 0 images

illuminaRatv1SYMBOL (Package: illuminaRatv1.db) : Map between Manufacturer Identifiers and Gene Symbols

illuminaRatv1SYMBOL is an R object that provides mappings between manufacturer identifiers and gene abbreviations.

● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaRatv1SYMBOL
● 0 images

illuminaRatv1UNIGENE (Package: illuminaRatv1.db) : Map between Manufacturer Identifiers and UniGene cluster identifiers

illuminaRatv1UNIGENE is an R object that provides mappings between manufacturer identifiers and UniGene identifiers.

● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaRatv1UNIGENE
● 0 images

illuminaRatv1UNIPROT (Package: illuminaRatv1.db) : Map Uniprot accession numbers with Entrez Gene identifiers

illuminaRatv1UNIPROT is an R object that contains mappings between the manufacturer identifiers and Uniprot accession numbers.

● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaRatv1UNIPROT, illuminaRatv1UNIPROT2PROBE
● 0 images