RforProteomics : Companion package to the 'Using R and Bioconductor for proteomics data analysis' publication

Package: RforProteomics
Type: Package
Title: Companion package to the 'Using R and Bioconductor for
proteomics data analysis' publication
Version: 1.10.2
Authors@R: c(person("Laurent", "Gatto", role=c("aut", "cre"),
email="lg390@cam.ac.uk"),
person("Sebastian", "Gibb", role="ctb",
email="mail@sebastiangibb.de"),
person("Vlad", "Petyuk", role="ctb",
email="petyuk@gmail.com"),
person('Thomas', 'Pedersen Lin', role='ctb',
email='thomasp85@gmail.com'))
Maintainer: Laurent Gatto <lg390@cam.ac.uk>
Depends: MSnbase
Imports: R.utils, Biobase, rpx, biocViews, BiocInstaller,
interactiveDisplay, shiny
Suggests: knitr, rmarkdown, BiocStyle, mzR, xcms, msdata, isobar,
MALDIquant (>= 1.12), MALDIquantForeign, readBrukerFlexData,
rTANDEM, synapter, synapterdata, IPPD, Rdisop, OrgMassSpecR,
BRAIN, rols, hpar, GO.db, org.Hs.eg.db, biomaRt, RColorBrewer,
ggplot2, reshape2, xtable, lattice, mzID, pRoloc, pRolocdata,
MSGFplus, MSGFgui, MSnID, msmsTests, msmsEDA, corrplot,
Heatplus, gplots, VennDiagram
Enhances: cleaver
Description: This package contains code to illustrate the 'Using R and
Bioconductor for proteomics data analysis' paper. Two
vignettes describe the code and data needed to reproduce
the examples and figures described in the paper and
functionality for proteomics visualisation.
URL: http://lgatto.github.com/RforProteomics/
biocViews: ExperimentData, MassSpectrometryData, ReproducibleResearch
License: Artistic-2.0
VignetteBuilder: knitr
Author: Laurent Gatto [aut, cre], Thomas Lin Pedersen [ctb],
Sebastian Gibb [ctb], Vlad Petyuk [ctb]
NeedsCompilation: no
Packaged: 2016-05-28 15:19:44 UTC; biocbuild